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  1. Gut microbiota is pivotal in maintaining children's health and well-being. The ingestion of enteric pathogens and dysbiosis lead to Environmental Enteric Dysfunction (EED), which is essential in stunting patho...

    Authors: Tristia Rinanda, Catur Riani, Anita Artarini and Lucy Sasongko
    Citation: Gut Pathogens 2023 15:54
  2. The conventional means of controlling the recurring pandemics of Type A Influenza Virus (IAV) infections remain challenging primarily because of its high mutability and increasing drug resistance. As an altern...

    Authors: Sandeep Yadav, Aparna Varma, Aparna Odayil Muralidharan, Sucharita Bhowmick, Samiran Mondal and Amirul Islam Mallick
    Citation: Gut Pathogens 2023 15:53
  3. Clarithromycin-containing triple therapy is commonly used to treat Helicobacter pylori infections. Clarithromycin resistance is the leading cause of H. pylori treatment failure. Understanding the specific mutatio...

    Authors: Naim Asyraf Rosli, Anis Rageh Al-Maleki, Mun Fai Loke, Eng Guan Chua, Mohammed Abdelfatah Alhoot and Jamuna Vadivelu
    Citation: Gut Pathogens 2023 15:52
  4. L.monocytogenes monocytogenes is an omnipresent bacterium that causes a fatal food-borne illness, listeriosis. The connection of this bacterium to E-cadherin through internalin A plays a significant role in the i...

    Authors: Ali Shivaee, Sara Bahonar, Mehdi Goudarzi, Ali Hematian, Bahareh Hajikhani and Behrooz Sadeghi Kalani
    Citation: Gut Pathogens 2023 15:51
  5. Children with autism spectrum disorder (ASD) often have digestive problems and microbial imbalances in their guts, suggesting that these conditions may play a role in the development of the disorder. Scopus-ba...

    Authors: Sa’ed H. Zyoud, Muna Shakhshir, Amani S. Abushanab, Amer Koni, Moyad Shahwan, Ammar A. Jairoun, Adham Abu Taha and Samah W. Al-Jabi
    Citation: Gut Pathogens 2023 15:50
  6. Citrobacter koseri (C. koseri) is a Gram-negative, motile, non-spore-forming facultative anaerobic bacillus belonging to the Enterobacteriaceae family. C. koseri typically utilizes citrate as the sole carbon sour...

    Authors: Mo Xian, Xiaolong Ji, Mingyu Zhong, Danhong Su, Jing Guan and Ruchong Chen
    Citation: Gut Pathogens 2023 15:49
  7. Zoonotic microorganisms are increasingly impacting human health worldwide. Due to the development of the global population, humans and animals live in shared and progressively crowded ecosystems, which enhance...

    Authors: Angelina Kraski, Soraya Mousavi, Markus M. Heimesaat, Stefan Bereswill, Ralf Einspanier, Thomas Alter, Greta Gölz and Soroush Sharbati
    Citation: Gut Pathogens 2023 15:48
  8. Cow’s milk protein allergy (CMPA) is one of the most common types of food allergy in infants. Faecal pathogen cultures showed that the positive rate of Clostridium perfringens was more than 30%, which was sign...

    Authors: Kun-yi Huang, Bing-shao Liang, Xiao-yan Zhang, Huan Chen, Ni Ma, Jiao-li Lan, Ding-You Li, Zhen-wen Zhou and Min Yang
    Citation: Gut Pathogens 2023 15:47
  9. Mycobacterium avium subsp. paratuberculosis (MAP) is the causative agent of paratuberculosis, a chronic gastrointestinal disease affecting ruminants. This disease remains widespread in part due to the limitation...

    Authors: Shannon C. Duffy, Andréanne Lupien, Youssef Elhaji, Mina Farag, Victoria Marcus and Marcel A. Behr
    Citation: Gut Pathogens 2023 15:46
  10. Patients with liver cirrhosis (LC) are prone to gastric mucosa damage. We investigated the alterations of gastric mucosa in LC patients and their possible mechanisms through multi-omics.

    Authors: Ruiguang Ma, Qian Li, Guoxian Yu, Jun Wang, Yueyue Li, Xinyan Xu, Yiqing Zhu, Min Dong, Yanjing Gao, Lixiang Li and Zhen Li
    Citation: Gut Pathogens 2023 15:45
  11. Rotaviruses (RVs) are the most common etiological agent of acute gastroenteritis among young children, even after vaccine introduction in low-income countries. A whole-genome classification representing the 11...

    Authors: Shainey Alokit Khakha, Tintu Varghese, Sidhartha Giri, Alan Durbin, Gene S. Tan, Maheswari Kalaivanan, Jasmin Helan Prasad and Gagandeep Kang
    Citation: Gut Pathogens 2023 15:44
  12. Fusobacterium nucleatum is a one of the most important anaerobic opportunistic pathogens in the oral and intestinal tracts of human and animals. It can cause various diseases such as infections, Lemierre's syndro...

    Authors: Qianhui Zhu, Arslan Dovletgeldiyev, Chen Shen, Kexin Li, Songnian Hu and Zilong He
    Citation: Gut Pathogens 2023 15:43
  13. In the Bengal Delta, research has shown that climate and cholera are linked. One demonstration of this is the relationship between interannual ocean-atmospheric oscillations such as the El Niño Southern Oscill...

    Authors: Debbie Shackleton, Fayyaz Ali Memon, Albert Chen, Shanta Dutta, Suman Kanungo and Alok Deb
    Citation: Gut Pathogens 2023 15:42
  14. Bacterial ghost cells (BGCs) are cells were drained of their genetic and cytoplasmic components. This work aimed to develop vaccine candidates against the Shigella flexneri (S. flexneri) 2b serotype using the BGC...

    Authors: Amany Abdelfattah, Reham Samir and Heba M. Amin
    Citation: Gut Pathogens 2023 15:41
  15. The human gut bacteriome is believed to have pivotal influences on human health and disease while the particular roles associated with the gut phageome have not been fully characterized yet with few exceptions...

    Authors: Khashayar Shahin, Abbas Soleimani-Delfan, Zihan He, Philippe Sansonetti and Jean-Marc Collard
    Citation: Gut Pathogens 2023 15:39
  16. The day-to-day (DTD) management model encourages patients to actively participate in their healthcare by setting goals. We determined the effectiveness of the DTD model in the treatment of Helicobacter pylori (H....

    Authors: Zhen Yang, Wenjie Xiong, Ruoyun Yang, Haisheng Qian, Zhi He, Meihong Chen, Jiajia Yang, Huaiming Sang, Jin Yan, Xiaobing Xu, Yun Wang, Guoxin Zhang and Feng Ye
    Citation: Gut Pathogens 2023 15:38
  17. Vancomycin-resistant enterococci (VRЕ) are recognized as important hospital pathogens which have become common in patients admitted to the intensive care units (ICUs). The purpose of this study was to evaluate...

    Authors: Preslava M. Hristova, Teodora V. Marinova-Bulgaranova, Tanya V. Strateva, Stefan V. Trifonov and Hristina Y. Hitkova
    Citation: Gut Pathogens 2023 15:37
  18. Gut microbiota manipulation may be a potential therapeutic target to reduce host energy storage. There is limited information about the effects of probiotics/synbiotics on intestinal microbiota composition in ...

    Authors: Gonca Kilic Yildirim, Meltem Dinleyici, Yvan Vandenplas and Ener Cagri Dinleyici
    Citation: Gut Pathogens 2023 15:36
  19. Women suffer from various distress and disturbances after menopause, including osteoporosis, a risk factor associated with multiple diseases. Altered gut microbiota has been implicated in postmenopausal osteop...

    Authors: Han Wang, Jing Liu, Zuoxing Wu, Yangyang Zhao, Man Cao, Baohong Shi, Baolong Chen, Ning Chen, Hao Guo, Na Li, Jian Chen and Ren Xu
    Citation: Gut Pathogens 2023 15:33
  20. Listeria monocytogenes (Lm) is a facultative, intracellular Gram-positive pathogenic bacterium that causes sepsis, a condition characterized by persistent excessive inflammation and organ dysfunction. However, th...

    Authors: Xuan OuYang, Peng Liu, Yuling Zheng, Hua Jiang, Qingyu Lv, Wenhua Huang, Huaijie Hao, Yaya Pian, Decong Kong and Yongqiang Jiang
    Citation: Gut Pathogens 2023 15:32
  21. Clostridioides difficile (C. difficile) is the major pathogen causing antibiotic-associated diarrhea. There are a variety of symptoms associated with C. difficile infection (CDI) in adults, including self-limitin...

    Authors: Zhirong Li, Ning Dong, Jihong Hao, Zirou Ouyang, Cuixin Qiang, Ying Yang, Chaoyi Mi, Yanan Niu, Jing Yang, Baojiang Wen, Liwei Wang, Shaodan Zhang and Jianhong Zhao
    Citation: Gut Pathogens 2023 15:31
  22. Authors: Meng-Ju Lin, Tung-Hung Su, Chieh-Chang Chen, Wei-Kai Wu, Shih-Jer Hsu, Tai-Chung Tseng, Sih-Han Liao, Chun-Ming Hong, Hung-Chih Yang, Chun-Jen Liu, Ming-Shiang Wu and Jia-Horng Kao
    Citation: Gut Pathogens 2023 15:29

    The original article was published in Gut Pathogens 2023 15:24

  23. Formyl peptide receptor 2 (Fpr2) plays a crucial role in colon homeostasis and microbiota balance. Commensal E. coli is known to promote the regeneration of damaged colon epithelial cells. The aim of the study wa...

    Authors: Keqiang Chen, John McCulloch, Rodrigo Das Neves, Gisele Rodrigues, Wang-Ting Hsieh, Wanghua Gong, Teizo Yoshimura, Jiaqiang Huang, Colm O’hUigin, Simone Difilippantonio, Matthew McCollum, Georgette Jones, Scott K. Durum, Giorgio Trinchieri and Ji Ming Wang
    Citation: Gut Pathogens 2023 15:28

    The Correction to this article has been published in Gut Pathogens 2023 15:60

  24. Vaccine is the most effective way to prevent the spread of communicable diseases, but the immune response induced by it varies greatly between individuals and populations in different regions of the world. Cur...

    Authors: Biqing Huang, Jianwei Wang and Lanjuan Li
    Citation: Gut Pathogens 2023 15:27

    The Correction to this article has been published in Gut Pathogens 2023 15:34

  25. Cancer-associated fibroblasts (CAFs) are essential stromal components in the tumor microenvironment of hepatocellular carcinoma (HCC). Hepatitis B virus (HBV) infection induces pathological changes such as liv...

    Authors: Chenhong Lin, Yeda Chen, Feng Zhang, Peng Zhu, Liangliang Yu and Wenbiao Chen
    Citation: Gut Pathogens 2023 15:26
  26. Dyspepsia still becomes a major challenge in upper gastrointestinal disease in Indonesia. This disease often correlated with Helicobacter pylori infection. However, the prevalence of this bacterium is generally l...

    Authors: Ari Fahrial Syam, Muhammad Miftahussurur, Dadang Makmun, Murdani Abdullah, Abdul Aziz Rani, Gontar Alamsyah Siregar, Marcellus Simadibrata, Nasrul Zubir, I. Dewa Nyoman Wibawa, Hery Djagat Purnomo, Chudahman Manan, Dharmika Djojoningrat, Achmad Fauzi, Kaka Renaldi, Hasan Maulahela, Amanda Pitarini Utari…
    Citation: Gut Pathogens 2023 15:25
  27. Hepatitis B virus (HBV) causes chronic hepatitis B (CHB), liver cirrhosis, and hepatocellular carcinoma. The evolution of human gut microbiota during the progression of HBV-related liver diseases remains uncle...

    Authors: Meng-Ju Lin, Tung-Hung Su, Chieh-Chang Chen, Wei-Kai Wu, Shih-Jer Hsu, Tai-Chung Tseng, Sih-Han Liao, Chun-Ming Hong, Hung-Chih Yang, Chun-Jen Liu, Ming-Shiang Wu and Jia-Horng Kao
    Citation: Gut Pathogens 2023 15:24

    The Correction to this article has been published in Gut Pathogens 2023 15:29

  28. Salmonella enterica serotype Typhi causes chronic enteric fever known as typhoid. Prolonged treatment regimen used for the treatment of typhoid and indiscriminate use of antibiotics has led to the emergence of re...

    Authors: Muzamil Rashid, Anmol Narang, Shubham Thakur, Subheet Kumar Jain and Sukhraj Kaur
    Citation: Gut Pathogens 2023 15:23
  29. Severe coronavirus disease 2019 (COVID-19) is associated with systemic hyper-inflammation. An adaptive interaction between gut microbiota and host immune systems is important for intestinal homeostasis and sys...

    Authors: Daizee Talukdar, Purbita Bandopadhyay, Yogiraj Ray, Shekhar Ranjan Paul, Jafar Sarif, Ranit D’Rozario, Abhishake Lahiri, Santanu Das, Debaleena Bhowmick, Shilpak Chatterjee, Bhabatosh Das and Dipyaman Ganguly
    Citation: Gut Pathogens 2023 15:22
  30. Clostridioides difficile, which causes life-threatening diarrheal disease, is considered an urgent threat to healthcare setting worldwide. The current standards of care solely rely on conventional antibiotic tre...

    Authors: Hamideh Raeisi, Maryam Noori, Masoumeh Azimirad, Seyed Reza Mohebbi, Hamid Asadzadeh Aghdaei, Abbas Yadegar and Mohammad Reza Zali
    Citation: Gut Pathogens 2023 15:21
  31. Bacteria form a highly complex ecosystem in the gastrointestinal (GI) tract. In recent years, mounting evidence has shown that bacteria can release nanoscale phospholipid bilayer particles that encapsulate nuc...

    Authors: Cheng-mei Tian, Mei-feng Yang, Hao-ming Xu, Min-zheng Zhu, Yuan Zhang, Jun Yao, Li-sheng Wang, Yu-jie Liang and De-feng Li
    Citation: Gut Pathogens 2023 15:20
  32. The gut microbiome derived short chain fatty acids perform multitude of functions to maintain gut homeostasis. Here we studied how butyrate stymie enteric bacterial invasion in cell using a simplistic binary m...

    Authors: Oishika Das, Aaheli Masid, Mainak Chakraborty, Animesh Gope, Shanta Dutta and Moumita Bhaumik
    Citation: Gut Pathogens 2023 15:19
  33. Intestinal dysbiosis is implicated in the origins of necrotising enterocolitis and late-onset sepsis in preterm babies. However, the effect of modulators of bacterial growth (e.g. antibiotics) upon the developing...

    Authors: R. A. Hutchinson, K. L. Costeloe, W. G. Wade, M. R. Millar, K. Ansbro, F. Stacey and P. F. Fleming
    Citation: Gut Pathogens 2023 15:18
  34. Despite the advancement in our understanding of cholera and its etiological agent, Vibrio cholerae, the prevention and treatment of the disease are often hindered due to rapid changes in drug response pattern, se...

    Authors: Fatema Tuz Jubyda, Kazi Sumaita Nahar, Indrajeet Barman, Fatema-Tuz Johura, Mohammad Tarequl Islam, Marzia Sultana, Wali Ullah, Jarin Tasnim, Sahitya Ranjan Biswas, Md Mamun Monir, Christine Marie George, Andrew Camilli, Niyaz Ahmed, Allen G. Ross, John D. Clemens and Munirul Alam
    Citation: Gut Pathogens 2023 15:17
  35. Non-typhoidal Salmonella (NTS) is a major foodborne zoonotic pathogen worldwide. In the current study, Various NTS strains were isolated from (cows, milk and dairy products in addition to humans) in New Valley an...

    Authors: Mohamed S. Diab, Asmaa S. Thabet, Mohamed Abd Elsalam, Rania M. Ewida and Sotohy A. Sotohy
    Citation: Gut Pathogens 2023 15:16
  36. The pseudo germ-free (PGF) model has been widely used to research the role of intestinal microbiota in drug metabolism and efficacy, while the modelling methods and the utilization of the PGF model are still n...

    Authors: Shanshan Wang, Qiuyu Wen, Yan Qin, Quan Xia, Chenlin Shen and Shuai Song
    Citation: Gut Pathogens 2023 15:15
  37. Rifaximin is a poorly absorbed broad-spectrum antibiotic used for hepatic encephalopathy. Although increased Lactobacillaceae and decreased Bacteroidetes abundance are characteristic of hepatic encephalopathy,...

    Authors: Kazuhiko Ikeuchi, Takeya Tsutsumi, Aya Ishizaka, Taketoshi Mizutani, Ayako Sedohara, Michiko Koga, Satoru Tamaoki and Hiroshi Yotsuyanagi
    Citation: Gut Pathogens 2023 15:14
  38. Bismuth salt is bacteriostatic and bactericidal against Helicobacter pylori (H. pylori). Little is known about the benefit of bismuth itself. Recently in Korea, government regulation changed to allow bismuth add-...

    Authors: Da Wit Shin, Dae Young Cheung, Ji Hee Song, Kyungseok Choi, Jihye Lim, Han Hee Lee, Jin Il Kim and Soo-Heon Park
    Citation: Gut Pathogens 2023 15:13
  39. Vancomycin-resistant enterococci (VRE) are well known agents that colonize the gastrointestinal tract of immunocompromised patients, especially those with hematologic malignancies. The aim of the current study...

    Authors: Preslava Mihaylova Hristova, Vladislav Milkov Nankov, Ivaylo Georgiev Hristov, Stefan Venelinov Trifonov, Alexandra Sashova Alexandrova and Hristina Yotova Hitkova
    Citation: Gut Pathogens 2023 15:12
  40. Interferon and nucleos(t)ide analogues are current therapeutic treatments for chronic Hepatitis B virus (HBV) infection with the limitations of a functional cure. Chrysin (5, 7-dihydroxyflavone) is a natural f...

    Authors: Sajad Ahmad Bhat, Syed Kazim Hasan, Zahoor Ahmad Parray, Zaheenul Islam Siddiqui, Shabnam Ansari, Ayesha Anwer, Saniya Khan, Fatima Amir, Mahboubeh Mehmankhah, Asimul Islam, Zarrin Minuchehr and Syed Naqui Kazim
    Citation: Gut Pathogens 2023 15:11
  41. Microorganisms have been linked to a variety of critical human disease, thanks to advances in sequencing technology and microbiology. The growing recognition of human microbe–disease relationships provides cru...

    Authors: Hassan Shokri Garjan, Yadollah Omidi, Mehdi Poursheikhali Asghari and Reza Ferdousi
    Citation: Gut Pathogens 2023 15:10
  42. Parkinson’s disease (PD) is the second most common neurodegenerative disease worldwide. Gut dysbiosis is hypothesized to cause PD; therefore, whether probiotics can be used as adjuvants in the treatment of PD ...

    Authors: Jong Mi Park, Sang Chul Lee, Chorom Ham and Yong Wook Kim
    Citation: Gut Pathogens 2023 15:9
  43. The prophylactic use of antimicrobials and zinc oxide (ZnO) in pig production was prohibited by the European Union in 2022 due to potential associations between antimicrobial and heavy metal usage with antimic...

    Authors: Daniel Ekhlas, Juan M. Ortiz Sanjuán, Edgar G. Manzanilla, Finola C. Leonard, Héctor Argüello and Catherine M. Burgess
    Citation: Gut Pathogens 2023 15:8
  44. Eradication of Helicobacter pylori provides the most effective treatment for gastroduodenal diseases caused by H. pylori infection. Clarithromycin, a member of the macrolide family, still remains the most importa...

    Authors: Bipul Chandra Karmakar, Sangita Paul, Surajit Basak, Manisha Ghosh, Piyali Mukherjee, Rajashree Das, Sujit Chaudhuri, Shanta Dutta and Asish Kumar Mukhopadhyay
    Citation: Gut Pathogens 2023 15:7
  45. CKLF-like MARVEL transmembrane domain containing 3 (CMTM3) plays an important role in cancer development. Although Helicobacter pylori (H. pylori) infection is a main cause of gastric cancer, the function of CMTM...

    Authors: Jing Zhang, Jing Ning, Weiwei Fu, Yanyan Shi, Jing Zhang and Shigang Ding
    Citation: Gut Pathogens 2023 15:6
  46. The emerging pathogen Campylobacter concisus has been isolated from patients with gastrointestinal diseases; however, it is also present in the gut of healthy individuals. The aim of this study was to compare IL-...

    Authors: Marta Emilie Yde Aagaard, Karina Frahm Kirk, Hans Linde Nielsen, Rudi Steffensen and Henrik Nielsen
    Citation: Gut Pathogens 2023 15:5